SAABlog
StorageIntermediate

EFS vs FSx: When to Choose Which?

Learn the key differences between Amazon EFS and FSx and the optimal file storage selection criteria for different workloads.

PHILOLAMB-Updated: January 31, 2026
EFSFSxFile StorageNFSSMB

Related Exam Domains

  • Domain 3: Design High-Performing Architectures

Key Takeaway

EFS is for Linux/NFS-based shared file systems; FSx is for Windows (SMB) or high-performance (Lustre) workloads. Operating system and protocol requirements are the key selection criteria.

Exam Tip

Exam Essential: "Linux + NFS = EFS", "Windows + SMB = FSx for Windows", "HPC + Lustre = FSx for Lustre"

When Do You Need File Storage?

EBS is block storage attached to a single EC2 instance. But there are situations where multiple instances need simultaneous access to the same files:

  • Sharing static content across a web server farm
  • Persistent storage for container-based applications
  • Sharing big data/ML training datasets
  • Shared home directories or development environments

For these cases, you need shared file systems like EFS or FSx.

Key Differences Between EFS and FSx

Amazon EFS (Elastic File System)

  • Protocol: NFS v4.0/4.1
  • Operating System: Linux only
  • Auto-scaling: Automatically scales to petabytes
  • Availability: Multi-AZ by default
  • Latency: ~10ms (General Purpose mode)

Amazon FSx Product Family

FSx offers 4 file system types:

FSx TypeProtocolPrimary Use
FSx for WindowsSMBWindows file server, AD integration
FSx for LustreLustreHPC, ML, video rendering
FSx for NetApp ONTAPNFS, SMB, iSCSIHybrid cloud, multi-protocol
FSx for OpenZFSNFSZFS-based Linux workloads

EFS vs FSx: Detailed Comparison

AspectEFSFSx for WindowsFSx for Lustre
ProtocolNFSSMB 2.0-3.1.1Lustre
OSLinuxWindows, LinuxLinux
Max Throughput10+ GB/s2-12 GB/sHundreds of GB/s
Latency~10ms~1msSub-millisecond
IOPSHundreds of thousandsMillionsMillions
S3 IntegrationNoneNoneNative support
Active DirectoryNoneNative supportNone
Auto-scalingYesNo (fixed size)No (fixed size)

When to Choose What?

Choose EFS When

  1. Linux-based shared storage

    • Shared file access from EC2, ECS, EKS, Lambda
    • Static content for web server farms
  2. Auto-scaling is needed

    • Unpredictable storage capacity requirements
    • Pay only for what you use
  3. Serverless integration

    • Lambda functions accessing file systems
    • Persistent volumes for containers

Exam Tip

EFS + Lambda: Mount EFS in Lambda functions to load large ML models (bypass the 250MB package limit)

Choose FSx for Windows When

  1. Windows workloads

    • .NET applications
    • SQL Server database files
  2. Active Directory integration

    • Enterprise user authentication
    • Group policy-based access control
  3. SMB protocol required

    • Windows file shares
    • DFS (Distributed File System) namespaces

Choose FSx for Lustre When

  1. High Performance Computing (HPC)

    • Hundreds of GB/s throughput needed
    • Sub-millisecond latency
  2. Machine Learning/Big Data

    • Large training datasets
    • SageMaker integration
  3. Native S3 integration

    • Access S3 data like a file system
    • Automatically save processed results back to S3

Exam Tip

FSx for Lustre + S3: Link an S3 bucket to FSx for Lustre and S3 objects automatically appear in the file system. Changes can be exported back to S3.

Choose FSx for NetApp ONTAP When

  1. Hybrid cloud

    • Migration from on-premises NetApp
    • NetApp SnapMirror replication
  2. Multi-protocol access

    • Access same data via NFS, SMB, iSCSI
    • Mixed Windows and Linux environments

Understanding Performance Modes

EFS Performance Modes

ModeCharacteristicsSuitable Workloads
General PurposeLow latency, web servingCMS, home directories
Max I/OHigh throughput, higher latencyBig data, media processing

EFS Throughput Modes

ModeCharacteristicsCost
BurstingProportional to storage size, credit-basedIncluded
ProvisionedGuaranteed fixed throughputAdditional fee
ElasticAuto scales up/downUsage-based

Cost Optimization Strategies

EFS Cost Reduction

  1. Lifecycle policies

    • Files not accessed for 30+ days → Auto-move to IA class
    • Up to 92% cost savings
  2. One Zone option

    • Suitable for dev/test environments
    • 47% cheaper than Standard

FSx Cost Reduction

  1. Data compression

    • FSx for Windows, ONTAP: Automatic compression support
    • Reduced actual storage capacity
  2. Right-sizing

    • FSx doesn't auto-scale
    • Monitor usage and adjust size accordingly

SAA-C03 Exam Focus Points

  1. Protocol matching: "Need NFS → EFS", "Need SMB → FSx for Windows"
  2. Performance requirements: "Sub-millisecond latency, hundreds of GB/s → FSx for Lustre"
  3. S3 integration: "Process S3 data like files → FSx for Lustre"
  4. AD integration: "Active Directory + file shares → FSx for Windows"
  5. Auto-scaling: "Unpredictable capacity, auto-scaling → EFS"

Exam Tip

Sample Exam Question: "A group of Linux EC2 instances needs to share ML training data. The data is stored in S3 and sub-millisecond latency is required. Which storage should you use?" → Answer: FSx for Lustre (Native S3 integration + ultra-low latency)

Frequently Asked Questions

Q: Which is cheaper, EFS or FSx?

EFS Standard is $0.30/GB/month, FSx for Windows is $0.13/GB/month. However, FSx requires provisioning a fixed size, so EFS may be more economical if actual usage is low.

Q: Can I use EFS on Windows?

No. EFS only supports the NFS protocol, making it Linux-only. Use FSx for Windows for Windows workloads.

Q: Can I use FSx from Lambda?

Lambda can only directly mount EFS. To access FSx data, indirect access through EC2 is required.

Q: Is FSx for Lustre suitable for persistent data storage?

Scratch type is temporary storage with no data persistence. Persistent type supports Multi-AZ replication for permanent storage.

Q: Can I access EFS from on-premises?

Yes. You can access EFS via NFS from on-premises through AWS Direct Connect or VPN.

References